PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_064170_aizt.t2
Common NameSOVF_064170
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 331aa    MW: 37081.6 Da    PI: 8.9854
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_064170_aizt.t2genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.44.2e-104386245
                       XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1  2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                       k+ k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Sp_064170_aizt.t2 43 KDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 86
                       677999*************************9777777666555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.7E-83689No hitNo description
SMARTSM003383.3E-842105IPR004827Basic-leucine zipper domain
PfamPF001703.8E-74386IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4154488IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.38E-74689No hitNo description
PROSITE patternPS0003604964IPR004827Basic-leucine zipper domain
PfamPF141447.9E-33128203IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MADGSPMTDI STDADTDERN KRFDIVPSTH AASDSSDRSK ETKDQKTLRR LAQNREAARK  60
SRLRKKAYVQ QLESSRLKLT QLEQELQRAR QQGIFISSSG DQAHSTGGNG AMAFDVEYSR  120
WLEEQNRQIN ELRAAVNAHA GDAELRVIVD SVVAHYEDIF RLKGNAAKTD VFHLLSGMWK  180
TPAERCFLWL GGFRSSELLK LLVNQLEPLT EQQVINIQNL QQTSQQAEDA LSQGMEQLQQ  240
SLAETLSSGS LGSSGSSGNV ANYMGQMAMA MGKLGTLEGF IRQADNLRQQ TLQQMHRILT  300
TRQSARALLA IHDYFSRLRA LSSLWLARPR E
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021858498.10.0transcription factor TGA2 isoform X2
SwissprotQ391400.0TGA6_ARATH; Transcription factor TGA6
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A0K9RI250.0A0A0K9RI25_SPIOL; Uncharacterized protein
STRINGXP_010670518.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-170TGACG motif-binding factor 6