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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sp_052830_dptr.t1 |
Common Name | SOVF_052830 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family |
WRKY |
Protein Properties |
Length: 397aa MW: 43483.4 Da PI: 7.1249 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sp_052830_dptr.t1 | genome | TBVR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 107.1 | 8.9e-34 | 207 | 264 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s+fprsYYrCts +C+vkk+vers +dp++v++tYeg+H+h+
Sp_052830_dptr.t1 207 EDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSFNDPSIVVTTYEGQHTHP 264
8********************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009624 | Biological Process | response to nematode |
GO:0009733 | Biological Process | response to auxin |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 397 aa
Download sequence Send
to blast |
MEMKNPVKME TLINSNSNHP SSKPKSISST TKSLANSNCF DSQVFDQKIS CSSSSTTTTS 60 SSATTGFMEL LGMQDMIHHI NPSLFDMIMM NSYGGSTFTE DFPTTMDPLA PDPTPPPPTS 120 SSIIVNPELS EILNTTTNSN NINIPTTPNS SSISSASNDE HQQEVDEDDD EEQKAKKIST 180 KAKKTNQKRQ REPRFAFMTK SEVDHLEDGY RWRKYGQKAV KNSPFPRSYY RCTSVSCNVK 240 KRVERSFNDP SIVVTTYEGQ HTHPCTILPR GVMPGPGYGS GFGFGVGATS SFGNLPMQMV 300 NNNHHQLQMN YVSSLIPHQL NHFGNNNNNN NNNITLPNPN PTTTTTTNVS NSCSVLASQE 360 RRFCGGAAAA AAPVGGALLR DHGLLQDIVP SIMKKEE
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