PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sp_051660_mood.t1 | ||||||||
Common Name | SOVF_051660 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family | bZIP | ||||||||
Protein Properties | Length: 464aa MW: 52732.3 Da PI: 6.2703 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.3 | 5.3e-11 | 141 | 199 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +++eLe++vk+L++e +aL +l+ k +l+se+ Sp_051660_mood.t1 141 KRAKRILANRQSAARSKERKARYMQELEKRVKSLQTEATALSVQLSLFKRDTGSLTSEN 199 9************************************************9999999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.6E-15 | 137 | 201 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.634 | 139 | 202 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.8E-8 | 141 | 206 | No hit | No description |
SuperFamily | SSF57959 | 1.45E-9 | 141 | 191 | No hit | No description |
Pfam | PF00170 | 1.4E-8 | 141 | 199 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 8.07E-20 | 142 | 191 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 464 aa Download sequence Send to blast |
MGHRRVHSEI YLRFPDEVSF GGSMDGGDNE ADDLLATYMD MEKIEYCAEN RNNPMNNNAP 60 QDHDHDLDLD LDLDHDQQHR HCFTMDEFSG FSSNNDNDND YSKINNNNNY NAGGGGGGAS 120 LEAKKAMPPD KLAELWVADP KRAKRILANR QSAARSKERK ARYMQELEKR VKSLQTEATA 180 LSVQLSLFKR DTGSLTSENI DLRRQLESME QQAQLRDALN DALKQELDRL AVATGDASTT 240 ADTFVMPLQN VPHHSQQQQQ QQHQRHQQHQ QQHQQQQSAC LFESNMMSNP HQIDSKMSCL 300 HPFELNISHT SQALDSHQTE ILHSSHQSVD QHTDSNIFNM PQQPKVQQHC LIGRKHYLPF 360 EPSRPRVPQY STTKTNMNYP TLTPPVVSVS PLGHLPPYSL ESNNSQSPEQ QVYVTSQPHL 420 LSQMTKQDHI TKTQALDMNN AFDSYQLVKI QGMSIIANEN IKGF |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021835734.1 | 0.0 | transcription factor RF2b-like | ||||
TrEMBL | A0A0K9RLX0 | 0.0 | A0A0K9RLX0_SPIOL; Uncharacterized protein | ||||
STRING | XP_010670608.1 | 1e-157 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40620.1 | 7e-58 | bZIP family protein |