PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia

Family

ERF

Protein Properties

Length: 146aa MW: 16307.4 Da PI: 8.4746

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sp_044440_eciy.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	24.8	5.5e-08	2	26	29	53
AP2 29 krfslgkfgtaeeAakaaiaarkkl 53 +r++lg+f taeeAa+ +++a+ + Sp_044440_eciy.t1 2 RRIWLGTFKTAEEAARTYDEAAVLM 26 89*******************9766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:3.30.730.10	1.0E-16	1	37	IPR001471	AP2/ERF domain
CDD	cd00018	7.66E-18	1	38	No hit	No description
SMART	SM00380	1.1E-7	1	42	IPR001471	AP2/ERF domain
PROSITE profile	PS51032	13.327	1	36	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	2.09E-10	1	37	IPR016177	DNA-binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 146 aa Download sequence Send to blast
KRRIWLGTFK TAEEAARTYD EAAVLMSGRK AKTNFPVTKT GPTNETTTPT TSFPNNCVST 60 LLNSKLRKSY QKLCPSLTCL RLDTENSHIG VWQKRSVGGQ SNSSWVMTLK FDGKEDNVEA 120 QEVVKGGISE EETIALQMIE ELLNNY

Functional Description ? help Back to Top
Source	Description
UniProt	Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269\|PubMed:15070782, ECO:0000269\|PubMed:15319479}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021839716.1	1e-105	ethylene-responsive transcription factor WIN1-like
Swissprot	Q9XI33	2e-41	WIN1_ARATH; Ethylene-responsive transcription factor WIN1
TrEMBL	A0A0K9RP16	1e-104	A0A0K9RP16_SPIOL; Uncharacterized protein (Fragment)
STRING	XP_010691150.1	7e-77	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15360.1	2e-39	ERF family protein

Publications ? help Back to Top
Taketa S, et al. Barley grain with adhering hulls is controlled by an ERF family transcription factor gene regulating a lipid biosynthesis pathway. Proc. Natl. Acad. Sci. U.S.A., 2008. 105(10): p. 4062-7 [PMID:18316719] Al-Abdallat AM,Al-Debei HS,Ayad JY,Hasan S Over-expression of SlSHN1 gene improves drought tolerance by increasing cuticular wax accumulation in tomato. Int J Mol Sci, 2014. 15(11): p. 19499-515 [PMID:25350113] Djemal R,Khoudi H Isolation and molecular characterization of a novel WIN1/SHN1 ethylene-responsive transcription factor TdSHN1 from durum wheat (Triticum turgidum. L. subsp. durum). Protoplasma, 2015. 252(6): p. 1461-73 [PMID:25687296] Sadler C, et al. Wax and cutin mutants of Arabidopsis: Quantitative characterization of the cuticular transport barrier in relation to chemical composition. Biochim. Biophys. Acta, 2016. 1861(9 Pt B): p. 1336-1344 [PMID:26965486] Sajeevan RS, et al. Expression of Arabidopsis SHN1 in Indian Mulberry (Morus indica L.) Increases Leaf Surface Wax Content and Reduces Post-harvest Water Loss. Front Plant Sci, 2017. 8: p. 418 [PMID:28421085]