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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sp_039500_miqj.t1 |
| Common Name | SOVF_039500 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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| Family |
bHLH |
| Protein Properties |
Length: 237aa MW: 27370.2 Da PI: 7.2193 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sp_039500_miqj.t1 | genome | TBVR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 31.1 | 4.2e-10 | 88 | 138 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
h e+Er+RR ++ s + L++llP + ++K s ++ L +A +YIk++q
Sp_039500_miqj.t1 88 IIHREIERKRRLEMSSLHASLKSLLPLeC---IKGKRSMSDHLGEAEKYIKQMQ 138
569************************88...********************99 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 237 aa
Download sequence Send
to blast |
MFDPYCSQNN EIFFNISDCV PPNQLLGDQI IPSLEQHNDL DNLLNQIPTL VEDPNRSKRP 60
LASKLTSIDH DQGNDDLNPN DIKKRQKIIH REIERKRRLE MSSLHASLKS LLPLECIKGK 120
RSMSDHLGEA EKYIKQMQQK LQVLNDKRDD LRKEMSNYKR IEYENDVKVN VFKGSIEVIV 180
CTKEDDGLPL SKVLQCLDQQ GFDVVNSISK KVNANFVHSV HAQVSTYFVR LYSLHLV
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| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 82 | 97 | KKRQKIIHREIERKRR |
| 2 | 93 | 98 | ERKRRL |
