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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sp_030320_sppf.t2 |
Common Name | SOVF_030320 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family |
WRKY |
Protein Properties |
Length: 288aa MW: 32260.7 Da PI: 6.0964 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sp_030320_sppf.t2 | genome | TBVR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 92.2 | 3.9e-29 | 78 | 136 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+ve+s+ dp+++++tY+ +Hnh+
Sp_030320_sppf.t2 78 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVEKSRADPNTLVVTYSYDHNHP 136
69*************************998****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MEGSLSELYG NVKYDMDMDM EITSDNSGDN SPFSTTFSAC ASISSPKRSR RAIQKKVVTF 60 PLKEVQGSRF KGECTPPSDS WAWRKYGQKP IKGSPYPRGY YRCSSSKGCP ARKQVEKSRA 120 DPNTLVVTYS YDHNHPWPIS RNHHQNRHNN VVAAAATSSA PTTAENNNNS TRVVSSTCTT 180 NNKSMQTKIE NNHVAFQQNN DEHDQLLPPT DELAWFTSDH QILENNLLFS NLNDLDMEKI 240 FPMREEDDSL FADLEELPEC SVVFRRAAGV VAVEECNLPP PTWCGATG
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