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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sp_028800_hini.t1 |
| Common Name | SOVF_028800 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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| Family |
NAC |
| Protein Properties |
Length: 345aa MW: 38199.8 Da PI: 8.5594 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sp_028800_hini.t1 | genome | TBVR | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 176.6 | 7.1e-55 | 15 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
lppGfrFhP+deel+++yL +k+++ ++++ +++++vd++k+ePwdLp k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke+
Sp_028800_hini.t1 15 LPPGFRFHPSDEELITFYLVNKISDATFSC-RAVADVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEI 105
79****************************.88***************99999*************************************** PP
NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+++ ++elvg+kktLvfy+grap+gekt+Wvmheyr+
Sp_028800_hini.t1 106 FNSvTTELVGMKKTLVFYRGRAPRGEKTNWVMHEYRV 142
*9988999***************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 345 aa
Download sequence Send
to blast |
MEGGDNQIQA KDESLPPGFR FHPSDEELIT FYLVNKISDA TFSCRAVADV DLNKCEPWDL 60
PGKAKMGEKE WYFFSLRDRK YPTGVRTNRA TNTGYWKTTG KDKEIFNSVT TELVGMKKTL 120
VFYRGRAPRG EKTNWVMHEY RVHSRSAYRS AKDEWVVCRV FQKSAGIKKY PTTTTTQSTS 180
TRAINLEMGQ NHHILTSPML PLDPTHFNLG RTYMMNNHVD QLAELTRALR SNGGATTANM 240
PIHSHINYPL GGHGGGGGGG GGGFTISGLN LNLGGAGGSV SQGPPPLRPM INQQDGQHDV 300
TSSMLSGLET GYVQLDMNIN GHGGSSSRFM NVDNCVEYDN YWPTY
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 5e-56 | 14 | 169 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 5e-56 | 14 | 169 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 5e-56 | 14 | 169 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 5e-56 | 14 | 169 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 7e-56 | 14 | 169 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 7e-56 | 14 | 169 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 7e-56 | 14 | 169 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 7e-56 | 14 | 169 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 7e-56 | 14 | 169 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 7e-56 | 14 | 169 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 7e-56 | 14 | 169 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 7e-56 | 14 | 169 | 19 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 5e-56 | 14 | 169 | 16 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 5e-56 | 14 | 169 | 16 | 171 | NAC domain-containing protein 19 |
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