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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sp_028480_oaxd.t1 |
Common Name | SOVF_028480 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family |
bZIP |
Protein Properties |
Length: 398aa MW: 42718.1 Da PI: 6.057 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sp_028480_oaxd.t1 | genome | TBVR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 64.4 | 2.1e-20 | 300 | 362 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elkr+rrkq+NRe+ArrsR+RK+ae++eL+++++ L++eN L++el++ + +++l +e+
Sp_028480_oaxd.t1 300 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEGLKEENANLRSELNRFRSDYEQLVAEN 362
89********************************************************98876 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 398 aa
Download sequence Send
to blast |
MGESETEKPD KEPKTPVAVS AQEQSSATST ATVNAEWPGF QAYSPIPPPG YMASSPQAHP 60 YMWGVQHMMP PYGTPPHPYM AMYPHGGLYA HPSMPPGSYP FNPYAIPPPN GLADASGNIP 120 ASADVEAKHH EGKEKLPIKR SKGSLGSLNM ITGKNNEDGK TTRPAANGSC SKSAESASDG 180 SSEGSDTNSQ NDSEGRQEGQ EADASHSGNS AHVAQNGVLN APHTMVNHAM AMVPMPGPGA 240 PVPVSGPATN LNIGMDYWGA PASSPIQAMR GNVSSAPVAT GIVPVGSRDN LQSQLWLQDE 300 RELKRQRRKQ SNRESARRSR LRKQAECDEL AQRAEGLKEE NANLRSELNR FRSDYEQLVA 360 ENAALKERLG EIPEDLGSNR AEHHMITETQ ESSKTDQV
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 316 | 322 | RRSRLRK |
2 | 316 | 323 | RRSRLRKQ |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT2G35530.1 | 1e-134 | basic region/leucine zipper transcription factor 16 |