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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sp_028240_stod.t1 |
| Common Name | SOVF_028240 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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| Family |
ERF |
| Protein Properties |
Length: 247aa MW: 28140.5 Da PI: 6.0453 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sp_028240_stod.t1 | genome | TBVR | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 61.5 | 1.9e-19 | 111 | 160 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W++eIrdp + r +lg+f taeeAa+a+++a+ +++g
Sp_028240_stod.t1 111 KYRGVRQRP-WGKWASEIRDP-----HraVRMWLGTFETAEEAARAYDRAAVRFRG 160
8********.**********7.....338************************998 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 247 aa
Download sequence Send
to blast |
MEAGNYFYNN QRPKSWQLDS QQEMSIMVSA LNQVISGNGG GGGGQEPPED GSHLVYEALR 60
NQQSFSTWSP PTSATSSGFP PNSQIENAET TTSSSSNNSG KQRTRRYNRN KYRGVRQRPW 120
GKWASEIRDP HRAVRMWLGT FETAEEAARA YDRAAVRFRG PRAKLNFSVS DYLPQLEEYN 180
RNNVHYRNQE QQQRSNNGSP SNHQEVETSE FVQITDGDEL EHWMNGMIDD SLPSLFYGES 240
PFGRPEF
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