|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sp_007860_sigc.t1 |
Common Name | SOVF_007860 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
|
Family |
bZIP |
Protein Properties |
Length: 351aa MW: 37420 Da PI: 5.6674 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sp_007860_sigc.t1 | genome | TBVR | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 70.4 | 2.7e-22 | 234 | 296 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+e+kre+rkq+NRe+ArrsR+RK+ae+eeL +kv++L eN+aL++e+++l + ++kl+se+
Sp_007860_sigc.t1 234 EREVKREKRKQSNRESARRSRLRKQAEMEELGKKVDSLNVENMALRSEINKLVEDSEKLRSEN 296
799**********************************************************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 351 aa
Download sequence Send
to blast |
MGNSEGEKPA NTEKAASPPR EQSGVHVYPD WATVQAYYGS GALPPPYYNP AAASGHAVQP 60 YMWPPPQMMA PYGTPYAMYP HGGMYGPSAA PVCMQVPAPL SLETPAKSSG KDSGSGKTAK 120 ESDVHAALGN GNANAESAGD GGARGQSQST DCGTEGSCER SYDSSAREDN SSRSCNGVMD 180 TGTCNMQMNG VVPGIPMASV NPVGNSPMPT PDMNHRPGAG TNANGVRGAP RQDEREVKRE 240 KRKQSNRESA RRSRLRKQAE MEELGKKVDS LNVENMALRS EINKLVEDSE KLRSENAALM 300 GKLGNIQGQG DETGTENRTE NQETSHINTE NLLSRVNNSV SDGVHEQHEE K
|
Nucleic Localization
Signal ? help
Back to Top |
|
No. |
Start |
End |
Sequence |
1 | 250 | 256 | RRSRLRK |
2 | 250 | 257 | RRSRLRKQ |