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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sp_004170_asdt.t1 |
Common Name | SOVF_004170 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family |
WRKY |
Protein Properties |
Length: 449aa MW: 49218.9 Da PI: 6.1108 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sp_004170_asdt.t1 | genome | TBVR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 98.1 | 5.6e-31 | 241 | 299 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp++++itY+++Hnh+
Sp_004170_asdt.t1 241 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRTDPNMLVITYTSDHNHP 299
699************************998****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009555 | Biological Process | pollen development |
GO:0009793 | Biological Process | embryo development ending in seed dormancy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 449 aa
Download sequence Send
to blast |
MDNNNNNNYQ GDLADIVRAS GGTTETTTTK VTTTNIGGQI PKWSFGSSNN DQYHQLKDDV 60 YSLIPTAETL LRDMDDAIAI STSSSNTFLN NFSIDHSSAT TNNNSNNNNN NNNNNNNNGV 120 CDIFPPNMVQ ISQDSNKANN IEDVKLPIQS AAGALPKNVN GAASFGFMSN QMLSNFNASC 180 SNSPKTGGFI DGANAIGGPH LQISSPRNQG IKRRKIQAKK VVCIPAPAAA NSRQTGEVVP 240 SDLWAWRKYG QKPIKGSPYP RGYYRCSSSK GCPARKQVER SRTDPNMLVI TYTSDHNHPW 300 PTQRNALAGS TRSSQPVSKT SSKPSNNNFH NVLIKEENQN NVSTTTTTTT LPVVKEEEIR 360 LKNDGFESYR PLILAADPTT INNNEHEQQA DQDFFTDLVE FESDDPLELF STQGCKGFES 420 FTGLFDWATT TNQEENDHTT IPKCSKADI
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |