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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sp_001060_cxwk.t1 |
Common Name | SOVF_001060 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family |
B3 |
Protein Properties |
Length: 297aa MW: 34208.3 Da PI: 8.6272 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sp_001060_cxwk.t1 | genome | TBVR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 36.6 | 8.3e-12 | 30 | 121 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92
ffk ++ s ++s+ l++p kf++++ ke s+t +l+ +sg++ +v + k +++ ++++GW+eFv+ ++ ++F ++g+s+f
Sp_001060_cxwk.t1 30 FFKLFL-SPISQSNKLRIPDKFTRKFR--KELSITSILKVPSGETQKVSI--VKEDNKLWFQNGWQEFVEYFSIDYAFLLLFNYEGNSNF-- 114
666664.45555666**********98..5699*****************..**********************************9999.. PP
EEEEE-S CS
B3 93 vvkvfrk 99
v++f+
Sp_001060_cxwk.t1 115 SVHIFDP 121
9999985 PP
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2 | B3 | 49.6 | 7.4e-16 | 202 | 285 | 14 | 98 |
T-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
B3 14 grlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
l ++ +fa++h + + +sk ++le g++++vk+ r++ +r+++++GW F+++ gL +gD++vF+l++ ++ l+v+v +
Sp_001060_cxwk.t1 202 LHLNISLPFARDHiKCMEMGSKLIKLEVYGGKQFTVKC--RRSYRRCTFGTGWIIFAREVGLAVGDVCVFELIDAKNYVLYVHVAK 285
3489999******955566899****************..*********************************9888888888765 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 297 aa
Download sequence Send
to blast |
MNQIKQQLQQ QQQQNIIHAN SGERKPCFSF FKLFLSPISQ SNKLRIPDKF TRKFRKELSI 60 TSILKVPSGE TQKVSIVKED NKLWFQNGWQ EFVEYFSIDY AFLLLFNYEG NSNFSVHIFD 120 PTACEISYPL NLRNSDSEVI QLDSDDEDID DASEVNPFGC QKTYWIGKYA EMVNVVAAAG 180 ISLPERPSFV TEIKPYALFR GLHLNISLPF ARDHIKCMEM GSKLIKLEVY GGKQFTVKCR 240 RSYRRCTFGT GWIIFAREVG LAVGDVCVFE LIDAKNYVLY VHVAKKDHKS RLPLNKA
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