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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopim12g010800.0.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
bZIP |
Protein Properties |
Length: 307aa MW: 34993.9 Da PI: 5.4415 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopim12g010800.0.1 | genome | CSHL | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 33.9 | 6.6e-11 | 179 | 222 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48
kr +r NR +A+rsR RK++++ eLe+ v +L+ae + L +
Sopim12g010800.0.1 179 KRIKRILANRQSAQRSRVRKLQYVSELERSVTTLQAEVSVLSPR 222
899*********************************98877655 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 307 aa
Download sequence Send
to blast |
MAHLPPRAPN MTQNWPDFSL HQKMENLAPS AHNLWADEFL DMSSRRGSHR RSMSDSIAFL 60 ESPMVEECRR LSSTTPGSGG TTNGHDEFER FDDEQQIMSM FNDDVHDMSC SNPSSPSDYI 120 NVTEDKKMNG PDQMMMQRKS DQNEEVESSC KTNEELATAN QNASTNNNEY SSERVVDPKR 180 IKRILANRQS AQRSRVRKLQ YVSELERSVT TLQAEVSVLS PRVAFLDHQR LLLNVDNSAL 240 RQKIAALAQD KLFKDAHQEA LKVEIERLRQ IYYQQNMKQQ MDNNNTTPVA DSTNTPPEIK 300 VQLSEN*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975524 | 0.0 | HG975524.1 Solanum lycopersicum chromosome ch12, complete genome. |