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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopim11g068370.0.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
bZIP |
Protein Properties |
Length: 373aa MW: 41735.2 Da PI: 8.3378 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopim11g068370.0.1 | genome | CSHL | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 32.2 | 2.4e-10 | 69 | 109 | 4 | 41 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41
k rr+++NReAAr+sR+RKka++++Le+ + ++Le+e
Sopim11g068370.0.1 69 AKTLRRLAQNREAARKSRLRKKAYVQQLETsrmRLAQLEQE 109
6889************************9833344444444 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 373 aa
Download sequence Send
to blast |
MFPSWPTKVH DTLRGSSKSI GGEQSSDSDS ALNTTISSRG EANVELESPS KSNYEKKSAG 60 SNSDRVTDAK TLRRLAQNRE AARKSRLRKK AYVQQLETSR MRLAQLEQEL QRARSQGIFM 120 GGGSTGPNIS SGASMFDMDY SRWLDDDQRQ ICELRTALQA HLGDGELRII VDAYIAHYDH 180 IFLLKGVVAK SDLFHLLTGI WASPAERGFL WLGGFKPSDL IKMLITQLDP LTQQQIVGIY 240 SLQQSSQQAE EALSQGLEQL KQSLIETIAT CSVNDGMHHM AIALGKLANL ESFVHQADNL 300 RQQTIHQLHR ILTIRQSARC FMMIGEYYGR LRALSSLWAS RPRETMMADD NSCQTTSELQ 360 MIQASQHHFS MR*
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Functional Description ? help
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Source |
Description |
UniProt | Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975523 | 1e-150 | HG975523.1 Solanum lycopersicum chromosome ch11, complete genome. |
Publications
? help Back to Top |
- Gutsche N,Zachgo S
The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] - Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Plant Sci., 2016. 252: p. 12-21 [PMID:27717447] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]
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