PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sopim07g063670.0.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
Family NZZ/SPL
Protein Properties Length: 353aa    MW: 38654.9 Da    PI: 8.5702
Description NZZ/SPL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sopim07g063670.0.1genomeCSHLView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NOZZLE20.96.1e-072220737181
              NOZZLE  37 tetkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaaisntatrlpvpvdrg.vvlqgfps......... 117
                         t++  + gr+  sk +q+k+k+p  rgmgv +ler +++++ k+ ++ +v       + +n     pv+   g       p          
  Sopim07g063670.0.1  22 TNQTSTGGRRRSSKNGQKKKKQPQ-RGMGVEQLERLRVQDQMKNSTIHGVHHNHQYYSNNNFPKLTPVSSFTGgGSASADPGnysnsilns 111
                         45566779*********9999996.********************9999999987766666655566654333022233333666777778 PP

              NOZZLE 118 ....................slgssrilcggvgsgqvmi........dpvispwgfvetsatt...helssisnpqmynass.nnrcdtcf 176
                                                 +  + g   + q+mi        +  +  +gf  +  +t   +el  ++n    n s   +rc +c 
  Sopim07g063670.0.1 112 spvlqfpklcavspndffmqQKVVNTGFIGSSSTNQLMIsshdhhqfQSQMNLYGFATSKPSTeksKELYPMPNLFSSNNSCfSDRCRSCN 202
                         8888888888777776644422224444555555677773222111123456688875543331114555555544434443267888999 PP

              NOZZLE 177 kkkrl 181
                         kkkr+
  Sopim07g063670.0.1 203 KKKRM 207
                         88886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF087449.0E-522152IPR014855Plant transcription factor NOZZLE
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MATSLQFSSD HHPIPQENHQ TTNQTSTGGR RRSSKNGQKK KKQPQRGMGV EQLERLRVQD  60
QMKNSTIHGV HHNHQYYSNN NFPKLTPVSS FTGGGSASAD PGNYSNSILN SSPVLQFPKL  120
CAVSPNDFFM QQKVVNTGFI GSSSTNQLMI SSHDHHQFQS QMNLYGFATS KPSTEKSKEL  180
YPMPNLFSSN NSCFSDRCRS CNKKKRMING EEISVHMEDM IREKEDSGTK PLLHSYSLPS  240
HQQKGVEIVA IHRKGSSSAL SSDEGAVMME YDFFPEKISS KSTNTYKSCF ENEATMMSAY  300
NSPESSSFAA AAAAAGNIIN GEASSVTTIS WAADTTTTSP TSSIDLSLKL SC*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755190.0HG975519.1 Solanum lycopersicum chromosome ch07, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001335302.10.0SPOROCYTELESS/NOOZLE-like protein
TrEMBLA0A1J0RE570.0A0A1J0RE57_SOLLC; SPOROCYTELESS/NOOZLE-like protein
STRINGSolyc07g063670.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1249978
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27330.15e-07sporocyteless (SPL)