PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sopim07g045560.0.1
Organism
Solanum pimpinellifolium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
Family SAP
Protein Properties Length: 74aa    MW: 7740.8 Da    PI: 11.851
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sopim07g045560.0.1genomeCSHLView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP57.32.5e-187642481
                 SAP 24 assgesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcs 81
                         ++g  +g+ + r    n+vwpePflealatq+ai++++s+ rlaaa+al n+fqv +
  Sopim07g045560.0.1  7 VGGGRGGGRRRLRGGGNNGVWPEPFLEALATQMAINTTSSINRLAAAQALSNLFQVHT 64
                        3445667788888889****************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 74 aa     Download sequence    Send to blast
MSTSEQVGGG RGGGRRRLRG GGNNGVWPEP FLEALATQMA INTTSSINRL AAAQALSNLF  60
QVHTPLKLLY TLS*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2536011e-121AC253601.6 Solanum lycopersicum strain Heinz 1706 chromosome 7 clone slm-50p24 map 7, complete sequence.
GenBankAC2536331e-121AC253633.6 Solanum lycopersicum strain Heinz 1706 chromosome 7 clone sle-4f18 map 7, complete sequence.
GenBankHG9755191e-121HG975519.1 Solanum lycopersicum chromosome ch07, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004243875.12e-34transcriptional regulator STERILE APETALA
TrEMBLA0A3Q7HAI37e-45A0A3Q7HAI3_SOLLC; Uncharacterized protein
STRINGSolyc07g045560.1.11e-45(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1588756
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.19e-08SAP family protein