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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopim06g074320.0.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
bZIP |
Protein Properties |
Length: 502aa MW: 55600.1 Da PI: 7.0323 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopim06g074320.0.1 | genome | CSHL | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 30.2 | 1e-09 | 198 | 236 | 5 | 43 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43
k rr+++NReAA++sR RKka++++Le+ L++ +
Sopim06g074320.0.1 198 KTLRRLAQNREAAKKSRIRKKAYVQQLETSRIRLSQLEQ 236
6789************************86655555554 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 502 aa
Download sequence Send
to blast |
MASQGIGETG LTDSGSSHHN HNMPYAVYRG LNPASTSFMY HSTPNGNQEG AGFDFGELEE 60 AFVLQGFKMS NDEAKASLYA AAATGKPAAT LEMFPSWPMR YQQTPRENSK SREESTDSGS 120 LSSRAQPHFE PESPISRKAS SDHQLQITHK SQEQQQLQDM ASNNNPRTGV LQTELSSKSN 180 SEKKKGAAST SERVLDPKTL RRLAQNREAA KKSRIRKKAY VQQLETSRIR LSQLEQELQR 240 ASSQGIFLGG GTAAGSNISS GAAIFDMEYS RWLDDDHRHI AELRTALQAH LSDGDLRLIV 300 DGYLAHYDEI FSLKGVAAKS DVFHLITGTW TTPAERCFLW MGGFRPSELI KMLIGQLDPL 360 TEQQVVGIYS LQQSSQQAEE ALSQGLEQLQ QSLIDTIATA SLHDGMHHMA LALGKLSNLE 420 GFVRQADNLR QQTLHQLHRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLIADDN 480 SCQTITGLQM VQSSQNHFSN F*
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Functional Description ? help
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Source |
Description |
UniProt | Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}. |
Publications
? help Back to Top |
- Gutsche N,Zachgo S
The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] - Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Plant Sci., 2016. 252: p. 12-21 [PMID:27717447] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]
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