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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopim04g082890.0.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
bZIP |
Protein Properties |
Length: 285aa MW: 32220.3 Da PI: 5.9521 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopim04g082890.0.1 | genome | CSHL | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 23.5 | 1.2e-07 | 123 | 164 | 4 | 45 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
+k+ +r +NR AA rsR+RKk ++ Le k+ +e+e k+L
Sopim04g082890.0.1 123 DKKRKRQLRNRDAAVRSRERKKLYVRDLELKSRYFESECKRL 164
799**********************************99887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0030968 | Biological Process | endoplasmic reticulum unfolded protein response |
GO:0005634 | Cellular Component | nucleus |
GO:0005789 | Cellular Component | endoplasmic reticulum membrane |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 285 aa
Download sequence Send
to blast |
MIDNIDDIIN WDDVDHIFHN VLDNPDDDQF TLHDSSPQSF QQIEQLLMND DDFGLVSDPQ 60 FAAESLSDFL VDSPLHSDHS HSPAEQAIGF SDPKVSSADQ DKHKVSQSPS DGDDELNNHD 120 PVDKKRKRQL RNRDAAVRSR ERKKLYVRDL ELKSRYFESE CKRLGFVLQC CLAENQALRF 180 SLHNSSANGV SMTKQESAVL FLESLLLGSL LWFLGITCLL ILPSQTWSVP EESQGSRNHG 240 LLVPIKEGKK TSRILLFLSF MMSKRCKASR SRMKLNPHPL GVVM*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 124 | 143 | KRKRQLRNRDAAVRSRERKK |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU526016 | 0.0 | EU526016.1 Solanum chacoense bZIP transcription factor protein mRNA, complete cds. |