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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopim03g113120.0.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
WRKY |
Protein Properties |
Length: 525aa MW: 58168.3 Da PI: 7.081 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopim03g113120.0.1 | genome | CSHL | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 95.8 | 2.9e-30 | 235 | 294 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+ +d +++++tYeg+Hnh+
Sopim03g113120.0.1 235 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApNCPVRKQVQRCIQDMSILITTYEGTHNHP 294
58***************************99****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0006952 | Biological Process | defense response |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 525 aa
Download sequence Send
to blast |
METVFRKSTH GGVVKQDIKI KASEEGFVED INDLKVEKER KSIHNEDDNS KSSQQKDLTG 60 DKKDDQLESA KADMEEVMEE NQRLKKHLDK IMKDYRNLQM QFHEVAQRDA EKTNTDVKHD 120 EAELVSLSLG RTSSDTKKEL SKLILSKKEN DEKEEDNLTL ALDCKFQSST KSSPSNLSPE 180 NSLGEVKDDE KGTDQTWPPH KVLKTIRNEE DDVTQQNPTK RAKVSVRVRC DTPTMNDGCQ 240 WRKYGQKIAK GNPCPRAYYR CTVAPNCPVR KQVQRCIQDM SILITTYEGT HNHPLPHSAT 300 SMAFTTSAAA SMLLSGSSSS GSGPTSSTAS ATTSALNYCF SDNSKPNPFY NLPHSSISSS 360 SHSQYPTITL DLTSNSSTSS FPGQNYRTIA NSNNYPPRYN NNNSSTNILN FSSFESNHLL 420 PMSWSNRNNQ DTHSQSYLQN NIKSAASTQT LLPQDTIAAA TKAITSDPKF QSALAVALTS 480 IIGSRSGNHH IDEKSGQNMK VTEPFPVLCS FPSTSPGDHK DYTL*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371). In association with WRKY72B, contributes to basal defense against root-knot nematodes (RKNs) and potato aphids, as well as Mi-1-mediated gene-for-gene resistance to these pests (PubMed:20409007). Both WRKY72A and WRKY72B are not required for gene-for-gene resistance mediated by Pto, another tomato R gene (PubMed:20409007). {ECO:0000269|PubMed:20409007, ECO:0000269|PubMed:24884371}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by infection with the root-knot nematode (RKN) Meloidogyne incognita and potato aphids. {ECO:0000269|PubMed:20409007}. |