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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sopim03g043840.0.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
bZIP |
Protein Properties |
Length: 171aa MW: 20097.7 Da PI: 4.9223 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopim03g043840.0.1 | genome | CSHL | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 31.7 | 3.4e-10 | 51 | 110 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
k+ rr ++NR++A+rsR RK ++i+ L++++k Le+ L ++e+ k++ +kl+ e+
Sopim03g043840.0.1 51 MKKLRRTISNRLSAQRSRMRKTEYIDLLRKEAKDLEERIAFLGRKIENDKDNNKKLQLEN 110
6999***************************************************99887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 171 aa
Download sequence Send
to blast |
MNEKRIKSDE PHLSLSLKTS IEYESVNRIS SLEEALNSEI KHGQVDPNMN MKKLRRTISN 60 RLSAQRSRMR KTEYIDLLRK EAKDLEERIA FLGRKIENDK DNNKKLQLEN QMLQLQLDSI 120 TNKSNLLAEL EAELKRLKEL EDEEDEEYID IDQYLNFDNM NISPFRIDGI *
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975515 | 1e-87 | HG975515.1 Solanum lycopersicum chromosome ch03, complete genome. |