 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sopim02g080680.0.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
| Family |
G2-like |
| Protein Properties |
Length: 230aa MW: 25774.2 Da PI: 9.1953 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sopim02g080680.0.1 | genome | CSHL | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 34.4 | 5e-11 | 2 | 25 | 32 | 55 |
G2-like 32 ilelmkvkgLtlehvkSHLQkYRl 55
+l++m+vkg+t++h+kSHLQ+YR+
Sopim02g080680.0.1 2 VLQIMNVKGVTISHIKSHLQMYRS 25
89*********************6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 230 aa
Download sequence Send
to blast |
MVLQIMNVKG VTISHIKSHL QMYRSLKHQE MQAEAANGRK RNRIDGADSM NNPRANLVHC 60
YNHINGKAAV VDGSDQMNFP QGNLVNGYNH IKGKATMFDG SDQMNFPQGN LVHCYNHNNG 120
KAPIFNGSNQ MNFPQGNLVH CYNHNNGKAP IFNGSNQMNF PQENLVHRYN HNNGKSVFDG 180
HLNPTVTTNY LEKIASSSTV FPPPWMEMMI IKSCEHMVLA VCQIRVQLQ*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC215407 | 0.0 | AC215407.2 Solanum lycopersicum cultivar Heinz 1706 chromosome 2 clone C02HBa0167J21, complete sequence. |
| GenBank | HG975514 | 0.0 | HG975514.1 Solanum lycopersicum chromosome ch02, complete genome. |
