 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sopim02g065290.0.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
| Family |
Dof |
| Protein Properties |
Length: 204aa MW: 21890.4 Da PI: 8.9516 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sopim02g065290.0.1 | genome | CSHL | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 123.2 | 8.5e-39 | 26 | 86 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
++++l+cprCds ntkfCyynny+lsqPr+fCk+CrryWt+GG+lr++P+Ggg+rkn k+s
Sopim02g065290.0.1 26 PDHHLPCPRCDSINTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRDIPIGGGSRKNAKRS 86
67899****************************************************9876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 204 aa
Download sequence Send
to blast |
MTLESSEKLV TKQQTGGVQA PPTQEPDHHL PCPRCDSINT KFCYYNNYNL SQPRHFCKSC 60
RRYWTQGGTL RDIPIGGGSR KNAKRSRIYT NTPFSSTIAS VSSHAVPGNS PFMLPLPAAN 120
QLLFGTDVKP INNFTSLLSS HGPGVLALGG IEDMGFGIGR GNVWPFTGAP DSYSRNYNNG 180
GGAGMWQFSG GEGGFVGSGD YFN*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC215367 | 0.0 | AC215367.2 Solanum lycopersicum cultivar Heinz 1706 chromosome 2 clone C02HBa0044L14, complete sequence. |
| GenBank | HG975514 | 0.0 | HG975514.1 Solanum lycopersicum chromosome ch02, complete genome. |
