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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sopen11g027460.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
| Family |
NAC |
| Protein Properties |
Length: 410aa MW: 46562.9 Da PI: 8.6745 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sopen11g027460.1 | genome | spenn | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 159.8 | 1e-49 | 40 | 166 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
+ pGfrF Ptdeel+++yLkkkveg++ + evi+ev+i k+ePwdLp k++ ++++ew+fFs+r +ky++g++++rat+sgyWkatgk+++v
Sopen11g027460.1 40 MFPGFRFCPTDEELISYYLKKKVEGSDKCV-EVISEVEIWKHEPWDLPgKSIVQSDNEWFFFSPRGRKYPNGSQSKRATESGYWKATGKERNV 131
579************************777.99***************878888999************************************ PP
NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+s +++ +g+k+tLvf+ grapkg++t+W+mhey +
Sopen11g027460.1 132 KS-GTNIIGTKRTLVFHIGRAPKGQRTQWIMHEYCM 166
**.999****************************86 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009845 | Biological Process | seed germination |
| GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
| GO:0033619 | Biological Process | membrane protein proteolysis |
| GO:0048573 | Biological Process | photoperiodism, flowering |
| GO:0071472 | Biological Process | cellular response to salt stress |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005886 | Cellular Component | plasma membrane |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 410 aa
Download sequence Send
to blast |
MEDEDLLGCN SEKKNGEIIE KTKISNSNGV EISVATASTM FPGFRFCPTD EELISYYLKK 60
KVEGSDKCVE VISEVEIWKH EPWDLPGKSI VQSDNEWFFF SPRGRKYPNG SQSKRATESG 120
YWKATGKERN VKSGTNIIGT KRTLVFHIGR APKGQRTQWI MHEYCMTANP LYQDSMVVCR 180
LRKNNEFHLN DTPGNQRNHL AVTNGTVDLS RAVQLNGLGL INGGECCSKE ASSSFSSHSV 240
EQIESGSESD KLNKELPQHH SSSHWKDCDE EDCFADIMKD DIIKLDDSSY KAKHNLLPTI 300
TRKLESSTKS PTSQEAQNPM SNRLPFQGTA NRRLKLQTEK VPRGVERFEL HEANKKNIHA 360
RGISRRFINI TPVKRMKQWS IPLLLISLML LIVLLCLFGV PQQVKWHYSS
|
| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 9e-44 | 31 | 183 | 8 | 164 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 9e-44 | 31 | 183 | 8 | 164 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 9e-44 | 31 | 183 | 8 | 164 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 9e-44 | 31 | 183 | 8 | 164 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 9e-44 | 31 | 183 | 11 | 167 | NAC domain-containing protein 19 |
| 3swm_B | 9e-44 | 31 | 183 | 11 | 167 | NAC domain-containing protein 19 |
| 3swm_C | 9e-44 | 31 | 183 | 11 | 167 | NAC domain-containing protein 19 |
| 3swm_D | 9e-44 | 31 | 183 | 11 | 167 | NAC domain-containing protein 19 |
| 3swp_A | 9e-44 | 31 | 183 | 11 | 167 | NAC domain-containing protein 19 |
| 3swp_B | 9e-44 | 31 | 183 | 11 | 167 | NAC domain-containing protein 19 |
| 3swp_C | 9e-44 | 31 | 183 | 11 | 167 | NAC domain-containing protein 19 |
| 3swp_D | 9e-44 | 31 | 183 | 11 | 167 | NAC domain-containing protein 19 |
| 4dul_A | 9e-44 | 31 | 183 | 8 | 164 | NAC domain-containing protein 19 |
| 4dul_B | 9e-44 | 31 | 183 | 8 | 164 | NAC domain-containing protein 19 |
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