PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sopen10g029290.1
Organism
Solanum pennellii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
Family bZIP
Protein Properties Length: 434aa    MW: 49208.5 Da    PI: 6.795
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sopen10g029290.1genomespennView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.57.6e-10141180541
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                       k  rr+++NReAAr+sR RKka+i++Le    + ++Le+e
  Sopen10g029290.1 141 KTLRRLAQNREAARKSRIRKKAYIQQLESsriRLAQLEQE 180
                       788************************9633355555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.0E-7134184No hitNo description
SMARTSM003387.9E-10137216IPR004827Basic-leucine zipper domain
PfamPF077161.3E-7138183IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.151139183IPR004827Basic-leucine zipper domain
CDDcd147088.22E-21141193No hitNo description
SuperFamilySSF579593.69E-7141183No hitNo description
PROSITE patternPS000360144159IPR004827Basic-leucine zipper domain
PfamPF141441.2E-29232306IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    Send to blast
MLHQSSSVIP ENFINKESSS TGGYDLGELD DQALFLYLDA QDPSSNHDQI QNNSEMMRPP  60
TLNIFPSQPM HVEPSSTKGN TGFVSSGSEK SSEPSIMELS KSKNNVLSTS GPEPKIPKRE  120
WNRKGQNSGS EQNAPKTTDH KTLRRLAQNR EAARKSRIRK KAYIQQLESS RIRLAQLEQE  180
LQRARSQGFH FAGNALLGGD QGLPNNIANM TSEAAAFDME YSRWLEEHHR LMCELRNAVT  240
EHFPENDLRI YVENCVTHYD EMMNLKSILV KTDVFHLISG MWRTPAERCF IWMGDFRPSE  300
LIKIILSQIE PLTEQQFVGI CGLQQSTQEA EEALSQGLEN LNQSVSDTIV SDALLANCPQ  360
NMANYMGQMA IAINKLSTIE GFVRQADNLR HQTIHRLHQI LTSRQAARCF LAIAEYFHRL  420
RALSSLWVAR PRHE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015055189.10.0bZIP transcription factor TGA10-like
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A3Q7IKI10.0A0A3Q7IKI1_SOLLC; Uncharacterized protein
STRINGSolyc10g078670.1.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22792145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-179bZIP family protein