PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sopen10g028950.1

Organism

Solanum pennellii

Taxonomic ID

28526

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon

Family

bZIP

Protein Properties

Length: 822aa MW: 88428.9 Da PI: 6.3214

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sopen10g028950.1	genome	spenn	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39.9	8.9e-13	338	398	2	62
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++ k+ r+++NRe+A sRqRKk ++eeLe+kv + + ++L +++ e +lk++ Sopen10g028950.1 338 EDEKKMARLIRNRESAHLSRQRKKHYVEELEDKVRIMHSTIQDLNAKISYVMAENLTLKTQ 398 5679999****************************************99999998888876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.6E-14	337	401	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.737	339	399	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.1E-11	340	398	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.31E-12	341	399	No hit	No description
Gene3D	G3DSA:1.20.5.170	5.1E-15	341	399	No hit	No description
CDD	cd14704	7.89E-18	342	392	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0042538	Biological Process	hyperosmotic salinity response
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0005783	Cellular Component	endoplasmic reticulum
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 822 aa Download sequence Send to blast
MSDQPPPVDE NLTGEFDGLA VPPLDHTFFV QHITEADQGI GDDFPMEFRS VDFSIDDVDF 60 DVSFDDFFPN PVDGDAFQKP NCLADCIGSE PGQMDFGQHG SQLIGSFDDA SGIFKSTSGD 120 SLEEAPGSNS VQMDPNCFGQ SGSQLIGNSV DSSTNVKLKL EEMSDISGNQ ATGGVMVMDT 180 SSPEIGQRSS SSRLSNEVSP SLPQISTDVS GYLNVPSPES NGSNHDVSRE SSNDKKGLSD 240 AKVLNCHSPE SQGSGNCGGL NYLSDSNKSV HSSPNLGSNS VKGGTVEHKF KLEGVSANIS 300 NCSSSLLKRK KGGEDLNNAS KHQKSSMFSL SDNVNNDEDE KKMARLIRNR ESAHLSRQRK 360 KHYVEELEDK VRIMHSTIQD LNAKISYVMA ENLTLKTQLG GTGVPPQVQP PPGMYPHPSM 420 VYPWMSYPPP YMMKPQGSQV PLVPIPKLKP QAAAPAPKST KKGEKKKSEV KTKKVASISL 480 LGVLFFMLLF GGLVPLLNVR YGGTREPFLG GFSVGSGFYE KHHGRVLVVD GPVNGTGYSG 540 KYSEKDYSSH CGRGDHSESN QQNTYKAADE FVHMGNGSNP LAASLYVPRN DKLVKIDGNL 600 IIQSVLASEK AMASHGGSDK NNRETGLAVP GDLAPAIPGS HPRLYRSSAV GQRALGTVEK 660 ENVQSTMQQW YLEGVAGPLM SSGMCTEVFQ FDVLSSAPGA IVRATNGRNI SMEQRQNATR 720 IHRNRRILNG PPVSLSRPSH NFSEEQSGTT GKQENFTGNK SLSSMVVSVL VDPREAGDAD 780 GDGIMGPKSL SRIFVVVLID SVKYVTYSCM LPFKAAAPLV TT

Sequence ? help Back to Top

Protein Sequence Length: 822 aa Download sequence Send to blast

MSDQPPPVDE NLTGEFDGLA VPPLDHTFFV QHITEADQGI GDDFPMEFRS VDFSIDDVDF  60
DVSFDDFFPN PVDGDAFQKP NCLADCIGSE PGQMDFGQHG SQLIGSFDDA SGIFKSTSGD  120
SLEEAPGSNS VQMDPNCFGQ SGSQLIGNSV DSSTNVKLKL EEMSDISGNQ ATGGVMVMDT  180
SSPEIGQRSS SSRLSNEVSP SLPQISTDVS GYLNVPSPES NGSNHDVSRE SSNDKKGLSD  240
AKVLNCHSPE SQGSGNCGGL NYLSDSNKSV HSSPNLGSNS VKGGTVEHKF KLEGVSANIS  300
NCSSSLLKRK KGGEDLNNAS KHQKSSMFSL SDNVNNDEDE KKMARLIRNR ESAHLSRQRK  360
KHYVEELEDK VRIMHSTIQD LNAKISYVMA ENLTLKTQLG GTGVPPQVQP PPGMYPHPSM  420
VYPWMSYPPP YMMKPQGSQV PLVPIPKLKP QAAAPAPKST KKGEKKKSEV KTKKVASISL  480
LGVLFFMLLF GGLVPLLNVR YGGTREPFLG GFSVGSGFYE KHHGRVLVVD GPVNGTGYSG  540
KYSEKDYSSH CGRGDHSESN QQNTYKAADE FVHMGNGSNP LAASLYVPRN DKLVKIDGNL  600
IIQSVLASEK AMASHGGSDK NNRETGLAVP GDLAPAIPGS HPRLYRSSAV GQRALGTVEK  660
ENVQSTMQQW YLEGVAGPLM SSGMCTEVFQ FDVLSSAPGA IVRATNGRNI SMEQRQNATR  720
IHRNRRILNG PPVSLSRPSH NFSEEQSGTT GKQENFTGNK SLSSMVVSVL VDPREAGDAD  780
GDGIMGPKSL SRIFVVVLID SVKYVTYSCM LPFKAAAPLV TT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	714	725	RQNATRIHRNRR

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator involved in salt and osmotic stress responses. Functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Functions as a stress sensor and transducer in ER stress signaling pathway. ER stress induces proteolysis of BZIP17 by SBT6.1 (S1P) and S2P, and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as protein involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269\|PubMed:17662035, ECO:0000269\|PubMed:20876872}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG975449	0.0	HG975449.1 Solanum pennellii chromosome ch10, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015055645.1	0.0	bZIP transcription factor 17
Swissprot	O22208	1e-136	BZP17_ARATH; bZIP transcription factor 17
TrEMBL	A0A3Q7IK08	0.0	A0A3Q7IK08_SOLLC; Uncharacterized protein
STRING	PGSC0003DMT400018486	0.0	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3029	24	50

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	1e-110	bZIP family protein

Publications ? help Back to Top
Zhou SF, et al. Membrane-associated transcription factor peptidase, site-2 protease, antagonizes ABA signaling in Arabidopsis. New Phytol., 2015. 208(1): p. 188-97 [PMID:25919792] Sagor GH, et al. The polyamine spermine induces the unfolded protein response via the MAPK cascade in Arabidopsis. Front Plant Sci, 2015. 6: p. 687 [PMID:26442007] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Kim JS,Yamaguchi-Shinozaki K,Shinozaki K ER-Anchored Transcription Factors bZIP17 and bZIP28 Regulate Root Elongation. Plant Physiol., 2018. 176(3): p. 2221-2230 [PMID:29367234] Cifuentes-Esquivel N, et al. bZIP17 regulates the expression of genes related to seed storage and germination, reducing seed susceptibility to osmotic stress. J. Cell. Biochem., 2018. 119(8): p. 6857-6868 [PMID:29693271] Guan P, et al. SENSITIVE TO SALT1, An Endoplasmic Reticulum-Localized Chaperone, Positively Regulates Salt Resistance. Plant Physiol., 2018. 178(3): p. 1390-1405 [PMID:30287478]