PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sopen10g028610.1
Organism
Solanum pennellii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
Family bZIP
Protein Properties Length: 324aa    MW: 36206.8 Da    PI: 7.2378
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sopen10g028610.1genomespennView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_152.51.1e-16254296547
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                       +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN++Lk 
  Sopen10g028610.1 254 RRQKRMIKNRESAARSRARKQAYTHELENKVSFLEEENERLKR 296
                       79**************************************994 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.0E-13250318IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.45252297IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-14254297No hitNo description
PfamPF001708.1E-14254297IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.19E-11254299No hitNo description
CDDcd147071.68E-24254299No hitNo description
PROSITE patternPS000360257272IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MVIQGMGSRG GGEAKANALA TQGSLYSLTL DEVRNQLGNC GKPLNSMNLD EFVKTVWTIE  60
SNQEVVGGND YGPVQQGASQ HHPSSITMSR DLSKKTVDEV WQDIQQGVKI DNVDKRSQER  120
QLTLGEITLE DFLVKAGVIA ESTQGKRISG LVFGVDSMSL TQQAQWPHYQ IPAMQQVPEQ  180
QHQQQQQNIP PVFMPGHPIQ QPLPVVANPI MDATYPETQV TMSPAHIIGT LSDTQTSGRK  240
RVAPRDVAEN SVERRQKRMI KNRESAARSR ARKQAYTHEL ENKVSFLEEE NERLKRQKEI  300
EDILPTVPPP EPKYQLRRTS SGPI
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754490.0HG975449.1 Solanum pennellii chromosome ch10, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015089045.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_015089046.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_015089047.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_015089048.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES31e-91AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A3Q7IK210.0A0A3Q7IK21_SOLLC; Uncharacterized protein
STRINGPGSC0003DMT4000185740.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33342448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.13e-93ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]