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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sopen10g005700.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
WRKY |
Protein Properties |
Length: 317aa MW: 35049.5 Da PI: 4.8623 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen10g005700.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 98.6 | 4.1e-31 | 146 | 204 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YY+C+++ gC ++k+ver+++dp+++++tY+ eHnh+
Sopen10g005700.1 146 SDMWSWRKYGQKPIKGSPYPRGYYKCSTSkGCLARKQVERNRSDPNMFIVTYTAEHNHP 204
79************************9988****************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 317 aa
Download sequence Send
to blast |
MEEDWDLNAV VRSCTATTTA ASSSGSSAIS FTNFQPRTTD DDNNSNNNSV FCFEDLVLKQ 60 SLLLNKNKIT DDFEELHQLC KPFITQQSEQ ITVISSQSPS QQLTDTKSIQ PNRALSCTSH 120 AQSPTIKRRK NQLKKVCQVA ADGLSSDMWS WRKYGQKPIK GSPYPRGYYK CSTSKGCLAR 180 KQVERNRSDP NMFIVTYTAE HNHPMPTHRN SLAGISRQKT AKPTGSSPVS SPVTNSPAPE 240 NQESSRDDKE DIFEDDDDEF GVSDVGLDKM EPEDDFFDGL DELEIPATGD NSPANFPATF 300 QFPWLANNAA TTAAGGR
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