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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sopen10g003840.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
WRKY |
Protein Properties |
Length: 259aa MW: 29084.8 Da PI: 6.7086 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen10g003840.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 93.8 | 1.3e-29 | 92 | 149 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D +WrKYGqK++kgs++pr+YYrC+s+ gCp+kk+ver+++dp+v++itY+++Hnh+
Sopen10g003840.1 92 DSSTWRKYGQKPIKGSPYPRGYYRCSSSkGCPAKKQVERCHHDPNVLIITYSSDHNHP 149
6779**********************998****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 259 aa
Download sequence Send
to blast |
MEGVLQKDPY LHKQEESFQR HSIKLKRYKK DPIAENSGEG SVSDDDETTE VNMPLPRKLS 60 KKGAKKRVIS VPIKDCDISR SNYKGEIYPP FDSSTWRKYG QKPIKGSPYP RGYYRCSSSK 120 GCPAKKQVER CHHDPNVLII TYSSDHNHPL PAAATKHRHP TTTFAATNTE QSTIFTDQPE 180 NDFIMAEVGA GELLGCFSYV GPTLLECTSP TMVGSTWVDD DVAFMLPIGE EDQSLFGDLG 240 ELPECSMVFR RYNRIVDGI
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