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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopen09g030200.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
ERF |
Protein Properties |
Length: 260aa MW: 29693.2 Da PI: 4.786 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen09g030200.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.4 | 4.2e-19 | 61 | 109 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a+++ ++k++g
Sopen09g030200.1 61 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARKIRG 109
9*******.**********954...4************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0006629 | Biological Process | lipid metabolic process |
GO:0034059 | Biological Process | response to anoxia |
GO:0035556 | Biological Process | intracellular signal transduction |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0004435 | Molecular Function | phosphatidylinositol phospholipase C activity |
Sequence ? help Back to Top |
Protein Sequence Length: 260 aa
Download sequence Send
to blast |
MCGGAILADI IHPRDRRLSS TDLWPTDFWP ISTQNVPLNP KRAQPSTGGE QMKKRQRKNL 60 YRGIRQRPWG KWAAEIRDPR KGVRVWLGTF NTAEEAARAY DREARKIRGK KAKVNFPNED 120 DDHYCYSHPE PPPLNITCDT NVTYNQESNN CYPFYSIENT EPVMEFASYN GIEDGGEEMV 180 KILNNRVVEE EEKTENEVQI LSDELMAYES LMKFYEIPYV DGQSVAATVN PAAETAVGGG 240 SMELWSFDDV SRLQPSYNVV
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AY496704 | 0.0 | AY496704.1 Lycopersicon esculentum ethylene-binding protein mRNA, complete cds. |