 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sopen09g027780.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
| Family |
WRKY |
| Protein Properties |
Length: 336aa MW: 38015.2 Da PI: 10.1014 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sopen09g027780.1 | genome | spenn | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 99.7 | 1.9e-31 | 270 | 327 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ e+p+++++tYegeHnh+
Sopen09g027780.1 270 DEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYEGEHNHP 327
9************************9988****************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005516 | Molecular Function | calmodulin binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 336 aa
Download sequence Send
to blast |
MEEIEEANRV AVESCHRVIS MLSQPHDEKI LARETGEAVH KFKKVVTLLN SNLGHARVRK 60
TKKILTPFPH SLLLENSSCK IVDDQLKPLQ LLPITYPENI RLEIGSNVNR IHPSLELNSH 120
SKNPLQLAQQ TSYHFAQQQQ QQRRYQLQQQ QMKQQADMMY RRSNSGISLN FDSSTCTPTM 180
SSTRSFISSL SIDGSVANLD GNAFHFIGAS RSADQSSYQH KKRCSGRGEE GSVKCGSSGR 240
CHCSKKRKHR VKRSIKVPAI SNKLADIPPD EYSWRKYGQK PIKGSPHPRG YYKCSSMRGC 300
PARKHVERCL EEPSMLIVTY EGEHNHPRLP SQSANA
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}. |
