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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sopen08g030250.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
ERF |
Protein Properties |
Length: 339aa MW: 37590.5 Da PI: 4.8587 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen08g030250.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.7 | 3.3e-19 | 136 | 186 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr+++ +g+W+AeIrdp r r +lg+++taeeAa +++a+ +l+g
Sopen08g030250.1 136 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDHAAIQLRG 186
59********.**********72....45*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0042991 | Biological Process | transcription factor import into nucleus |
GO:0048364 | Biological Process | root development |
GO:0048825 | Biological Process | cotyledon development |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042802 | Molecular Function | identical protein binding |
Sequence ? help Back to Top |
Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MDQQTMLSSG VKYTEHRKQI TMVRPAPPET FTGRRRSSEM NAAGPRVVRI TVTDADATDS 60 SSDEGEQGFY GRQRVRKFVN EVRIEQSSNC NGSVNGVLRN GSSSETAPVV AAAPKRRKKT 120 AGATTAASKL KVNHVKKFRG VRQRPWGKWA AEIRDPLRRV RLWLGTYDTA EEAAMVYDHA 180 AIQLRGPDAL TNFATPPATK TSCSGYNSGE ESHNDQRSPK SVLRCASTSF DESQNNEEAE 240 AESLSILPSD IKDKNDISMS ENFCDLPPFE SFFPDDLFQF ENPITISDLF FEPDTLPDCN 300 NMLFGSSTTD YSFGSSSWPE EDFFQDFGDV FGSDPLVAL
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