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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sopen08g029910.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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| Family |
WRKY |
| Protein Properties |
Length: 306aa MW: 34974 Da PI: 5.4533 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sopen08g029910.1 | genome | spenn | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 89.6 | 2.5e-28 | 130 | 188 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D+++WrKYGqK++kgs++prsYYrC+s+ gC ++k+ve+s +++ ++++tY+ eHnh+
Sopen08g029910.1 130 SDKWAWRKYGQKPIKGSPYPRSYYRCSSSkGCLARKQVEQSCTENGTFIVTYTAEHNHS 188
79*************************998****************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MMVMDWGLQA VVIGSSSSYS ANNIDFSPKL DFQESDHQYL SFSHEMKKEF FISDELEELY 60
KPFYHVDGGQ NILMGSSISL IPKEIIKEEK REEEQQQVVA PTSTYVPKYK KRKNEQKRVV 120
LQLKADDLSS DKWAWRKYGQ KPIKGSPYPR SYYRCSSSKG CLARKQVEQS CTENGTFIVT 180
YTAEHNHSQP TRRNSLAGTI KSKFPNSKNT NIKKNIVKDE KISSPHGSTS NNNLGFSPET 240
LMIDEFQEIE MNDHEEIKNM FEGSDENECV SIQEMFDGDF FAGLEDIHDG FTSSFGCNNS 300
TSPFSF
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