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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopen08g004130.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
WRKY |
Protein Properties |
Length: 360aa MW: 40636.5 Da PI: 5.9407 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen08g004130.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 87.4 | 1.3e-27 | 133 | 193 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
dDgy+WrKYGqK++ +++prsYYrCt++ +C+++k+v+rs++dp+v++itY+g+Hn++
Sopen08g004130.1 133 DDGYSWRKYGQKDILRAKYPRSYYRCTYRhmqNCWATKHVQRSDDDPTVFDITYRGSHNCH 193
8**************************99899***************************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0009816 | Biological Process | defense response to bacterium, incompatible interaction |
GO:0010150 | Biological Process | leaf senescence |
GO:0010193 | Biological Process | response to ozone |
GO:0010200 | Biological Process | response to chitin |
GO:0031347 | Biological Process | regulation of defense response |
GO:0042542 | Biological Process | response to hydrogen peroxide |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0009507 | Cellular Component | chloroplast |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 360 aa
Download sequence Send
to blast |
MDCASNWEYK TLINELTQGI EHTKQLREHF HSTASTFENQ ELLLQKILSS YEQSLLILNW 60 GGSTVQSPPA LPPSAGAIEY SVSVNGSPKS DDKKRSDQDQ HALINISKKR KSQPTWTEQV 120 KVSAESGFEG PTDDGYSWRK YGQKDILRAK YPRSYYRCTY RHMQNCWATK HVQRSDDDPT 180 VFDITYRGSH NCHHATYSAP QPTSPEKQEF ENQAVYPTGQ QYSNQVLMNL RANLRVNTND 240 LDENDPAACH FSFVPTFSSG MTDDNRHFQI SHVDDNLIGS GYSPSFVSPT TPESNYFSVS 300 TSSQMNGYGM VHNLHHSESD LTDIFSANTS TTSSPIVGDF SLDHLELDPN FPFGNPKFFS
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 92 | 110 | KKRSDQDQHALINISKKRK |