 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sopen07g026940.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
| Family |
WRKY |
| Protein Properties |
Length: 275aa MW: 29886.8 Da PI: 5.3625 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sopen07g026940.1 | genome | spenn | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 96 | 2.6e-30 | 75 | 133 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ itY +eHnh+
Sopen07g026940.1 75 QDSWSWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRLDPTMLLITYCSEHNHQ 133
79*************************998****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 275 aa
Download sequence Send
to blast |
MEDSSYKNLF FHKQEDSTGT PPDNAADSCF SGDEAAEVSM PSPRKSRRGA KKKVISVPII 60
EGDGSRSKGE VYPPQDSWSW RKYGQKPIKG SPYPRGYYRC SSSKGCPARK QVERSRLDPT 120
MLLITYCSEH NHQIPAAAAA KHHHQNHPTT TTSSPTTSTG TAGDNNATAA VATDSTVVDK 180
SSPEEPDLFA YQHDNGFSEL AGELGWFSDM GTTTTFMEST SSSMAGSTWN DSDVALMLPI 240
REEDQSLYGD LGELPECSVV FRRYSVETPC CGGTG
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT013284 | 0.0 | BT013284.1 Lycopersicon esculentum clone 134891F, mRNA sequence. |
