 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sopen07g023530.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
| Family |
G2-like |
| Protein Properties |
Length: 227aa MW: 25943.2 Da PI: 7.882 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sopen07g023530.1 | genome | spenn | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 95.2 | 5e-30 | 20 | 72 | 2 | 54 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54
prlrWtp+LHe F+eav+ LGG +kAtPk+i ++m vkgL ++hvkSHLQ+YR
Sopen07g023530.1 20 PRLRWTPQLHELFIEAVQLLGGGHKATPKRIQQMMAVKGLNISHVKSHLQMYR 72
8**************************************************** PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 227 aa
Download sequence Send
to blast |
MKNKCCKRIG VRQYKKSSIP RLRWTPQLHE LFIEAVQLLG GGHKATPKRI QQMMAVKGLN 60
ISHVKSHLQM YRNLKERGNL NIVRSVNNFH EETPQFSWSS PQHVCETLLE HGPSKISKQI 120
DPGSDKLPNY KAIINAYIAE NNIYCYDYQE AQGSLSSGMT KEEEEDDGGG GPSSEICEFS 180
HEREINFWPL NDYNHQNSQY DSSTKQVLKS TKDNSHVNLD LSISLCF
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 4e-18 | 21 | 77 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 4e-18 | 21 | 77 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 4e-18 | 21 | 77 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 4e-18 | 21 | 77 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 4e-18 | 21 | 77 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 4e-18 | 21 | 77 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 4e-18 | 21 | 77 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 4e-18 | 21 | 77 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975446 | 1e-130 | HG975446.1 Solanum pennellii chromosome ch07, complete genome. |
