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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopen07g023530.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
G2-like |
Protein Properties |
Length: 227aa MW: 25943.2 Da PI: 7.882 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen07g023530.1 | genome | spenn | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 95.2 | 5e-30 | 20 | 72 | 2 | 54 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54
prlrWtp+LHe F+eav+ LGG +kAtPk+i ++m vkgL ++hvkSHLQ+YR
Sopen07g023530.1 20 PRLRWTPQLHELFIEAVQLLGGGHKATPKRIQQMMAVKGLNISHVKSHLQMYR 72
8**************************************************** PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 227 aa
Download sequence Send
to blast |
MKNKCCKRIG VRQYKKSSIP RLRWTPQLHE LFIEAVQLLG GGHKATPKRI QQMMAVKGLN 60 ISHVKSHLQM YRNLKERGNL NIVRSVNNFH EETPQFSWSS PQHVCETLLE HGPSKISKQI 120 DPGSDKLPNY KAIINAYIAE NNIYCYDYQE AQGSLSSGMT KEEEEDDGGG GPSSEICEFS 180 HEREINFWPL NDYNHQNSQY DSSTKQVLKS TKDNSHVNLD LSISLCF
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4k_A | 4e-18 | 21 | 77 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 4e-18 | 21 | 77 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 4e-18 | 21 | 77 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 4e-18 | 21 | 77 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 4e-18 | 21 | 77 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 4e-18 | 21 | 77 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 4e-18 | 21 | 77 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 4e-18 | 21 | 77 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975446 | 1e-130 | HG975446.1 Solanum pennellii chromosome ch07, complete genome. |