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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopen07g001750.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
WRKY |
Protein Properties |
Length: 509aa MW: 55755.9 Da PI: 7.126 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen07g001750.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 79.5 | 3.6e-25 | 199 | 255 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+DgynWrKYGqK+vk+ + +rsYYrCt+++C++kk +e+s++ ++v+ei+Y+ +Hnh+
Sopen07g001750.1 199 RDGYNWRKYGQKQVKSPQGSRSYYRCTHSECCAKK-IECSDHTNRVMEIIYRTQHNHD 255
7********************************98.*********************7 PP
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2 | WRKY | 96.6 | 1.6e-30 | 371 | 428 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++er + +++++itY+g H+h+
Sopen07g001750.1 371 SDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIERVVDTTSALTITYKGVHDHD 428
7********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 509 aa
Download sequence Send
to blast |
MDDENESSKS TGLKNSNLEE DKISNKIENS SVHNDDNGDD RVIDGSSGAE SLRESKTEAL 60 ISETLAHPNA ESSVQIEIDG QSEFDSEFSP SYQLSEVPVE YELPSFGFSE KIKDRISVTK 120 PGTLNAQART EHQRRVPDAA SSLELSSLSV AQSISSVPSA TLAERRSAAA VNCSTGEVVK 180 QSSDAQVLAL VPVLKRPTRD GYNWRKYGQK QVKSPQGSRS YYRCTHSECC AKKIECSDHT 240 NRVMEIIYRT QHNHDPPPRV NCPRESKSAL LSSPTNGKSI IAHPSRNSIE TVVSSLKENL 300 QESLPIAETA NQDSGGSDTD TEITIREEHR DEAGQKKRSR KSDTSCLDSV SKPGKKPKLV 360 VHAACDVGIS SDGYRWRKYG QKMVKGNPHP RNYYRCTSAG CPVRKHIERV VDTTSALTIT 420 YKGVHDHDMP VPKKHHGPPS APLIAATAPA SVTNMHANKP EPLQHQKSTT QWSVDKEGEL 480 TGEKLDGGGE KAMESARTLL SIGFEIKPC
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |