 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sopen06g033910.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
| Family |
GRAS |
| Protein Properties |
Length: 132aa MW: 15868.2 Da PI: 5.7215 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sopen06g033910.1 | genome | spenn | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 123.9 | 1.9e-38 | 2 | 128 | 248 | 374 |
GRAS 248 hnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqakll 340
+n++ F +rf eal ++s+ fd++ea++pre+e r++ E+e++gr+i+nv+a egaer+er e+++kW++r + aGF+++pl+++++k++k+
Sopen06g033910.1 2 YNASFFTTRFREALFHFSSQFDMFEATMPREDEGRMMFEQEVFGRDIMNVIASEGAERVERPESYKKWSMRNQIAGFRQLPLDQDIVKEVKTK 94
6999***************************************************************************************** PP
GRAS 341 lrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+++++ + v+e+s+++++gWk+r ++++S+W+
Sopen06g033910.1 95 VKMFYHADFLVDEDSNWMLQGWKGRIMYALSVWE 128
*****888*************************5 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 132 aa
Download sequence Send
to blast |
MYNASFFTTR FREALFHFSS QFDMFEATMP REDEGRMMFE QEVFGRDIMN VIASEGAERV 60
ERPESYKKWS MRNQIAGFRQ LPLDQDIVKE VKTKVKMFYH ADFLVDEDSN WMLQGWKGRI 120
MYALSVWEPI HK
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
