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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopen06g027260.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
WRKY |
Protein Properties |
Length: 651aa MW: 71975.5 Da PI: 6.3308 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen06g027260.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 95.9 | 2.7e-30 | 281 | 340 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+
Sopen06g027260.1 281 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApNCPVRKQVQRCAEDMSILITTYEGTHNHT 340
58***************************99****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 651 aa
Download sequence Send
to blast |
MENKNKAEYY SPDDEDRDID DQENIVHQFG KGRKEREDDI SKPSSPHHKD YMNIDNIEEG 60 AVNVMVKRER SPPEHNSMAS SSTHKEQDDQ LASAKDEMRE VMEENQRLRM HLDRMMKEYR 120 NLQNQFHDIV QKETDQKSSS TTVNTSTTHH DHESDQEADQ LVSLSLGRTT SDMKKDDLSK 180 ILKKDKVHDD EGVIIISNNN KSLDLGLDCK FETTPTECSP VNYSPENSLD DIQANKDENE 240 ETSNKNLKTM RNNGDGDDVS QQNPTKRARV SVRVRCDAPT MNDGCQWRKY GQKIAKGNPC 300 PRAYYRCTVA PNCPVRKQVQ RCAEDMSILI TTYEGTHNHT LPLSATAMAS TTSAAASMLL 360 SGSSNSSDPN PQVTATTTTT PTTTTSANIN GLNFYLSDTS KHHKSPYYFP NSSISASAPN 420 SLPTITLDLT STSSSSPSSL SHLNRMTQNF PPRYNYNNNN STTNLNFSSV LESNSLPISW 480 TNNYPNQTYN KNNQNFGPLT FSSRSSQDNI FQSYLQKNTT QSSLPPDTIA AATKAITSDP 540 NFHSALAAAL TSIIGNSPIE NKSVHNLNVT QPFPILSSLP SSSNPNKCSS SLLNKPTSSA 600 SANNNNNNNN SNSTQQPGNN SMVFFGQSSS SLPFSTSNKG KSTSPSDSKF D
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Functional Description ? help
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Source |
Description |
UniProt | In association with WRKY72A, contributes to basal defense against root-knot nematodes (RKNs) and potato aphids, as well as Mi-1-mediated gene-for-gene resistance to these pests (PubMed:20409007). Both WRKY72A and WRKY72B are not required for gene-for-gene resistance mediated by Pto, another tomato R gene (PubMed:20409007). {ECO:0000269|PubMed:20409007}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by infection with the root-knot nematode (RKN) Meloidogyne incognita and potato aphids. {ECO:0000269|PubMed:20409007}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GU017422 | 0.0 | GU017422.1 Solanum lycopersicum WRKY72-like protein mRNA, complete cds. |