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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopen06g026100.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
ERF |
Protein Properties |
Length: 264aa MW: 30082 Da PI: 8.4391 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen06g026100.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.4 | 2.3e-20 | 73 | 123 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +g+W+AeIrdp + +r++lg+f tae+Aa a+++a++k++g+
Sopen06g026100.1 73 QYRGVRQRP-WGKWAAEIRDPE----KaARVWLGTFHTAEDAAIAYDEAALKFRGN 123
69*******.**********73....35*************************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 264 aa
Download sequence Send
to blast |
MYSSARSQHD MSTMVSVLSQ VIGIKSTTNT NCSSSSSTHH KPLLTLNHQS NTMQNQLPQL 60 NQQQGNNEKR RRQYRGVRQR PWGKWAAEIR DPEKAARVWL GTFHTAEDAA IAYDEAALKF 120 RGNKAKLNFP ERVQSTTDRF GISYLITNTN HQKDQFQPSN FLPNSDQLQH HHYSNHNADD 180 LKFGVSPSFY HPTAGFNPKA LDLVEPSKSS SMTYLVQQAS SHEVQEEPRY INHQQEDENN 240 LKFSSYFGTY SSSGPTLGEF EDQK
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator of cell proliferation and axillary bud outgrowth. Involved in maintaining the structure of the shoot apical meristem as well as plastochron and phyllotaxy. Activates several genes involved in cell cycle regulation and dormancy breaking, including CYCD3-3, DPA, and BARD1. Strongly down-regulates DRM1, DRMH1, MARD1 and several genes encoding different types of cell wall-remodeling proteins. {ECO:0000269|PubMed:23616605}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Transiently up-regulated 6 to 15 hours after decapitation. {ECO:0000269|PubMed:23616605}. |