 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sopen06g025710.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
| Family |
WRKY |
| Protein Properties |
Length: 359aa MW: 39654.3 Da PI: 8.2726 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sopen06g025710.1 | genome | spenn | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 95.5 | 3.7e-30 | 167 | 226 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dgy+WrKYGqK+ +++++pr+Y+rC++a gCpvkkkv+rs ed+++v+ tYegeHnh+
Sopen06g025710.1 167 VKDGYQWRKYGQKVTRDNPCPRAYFRCSFApGCPVKKKVQRSIEDQSIVVATYEGEHNHP 226
58***************************99****************************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0002237 | Biological Process | response to molecule of bacterial origin |
| GO:0009611 | Biological Process | response to wounding |
| GO:0009751 | Biological Process | response to salicylic acid |
| GO:0010200 | Biological Process | response to chitin |
| GO:0042742 | Biological Process | defense response to bacterium |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0050691 | Biological Process | regulation of defense response to virus by host |
| GO:0050832 | Biological Process | defense response to fungus |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 359 aa
Download sequence Send
to blast |
MEFTSLVDTS LDLSFRPRQK VLKQEVQSDF TGLSIERENM VVKNEAGDLL EELNRVSSEN 60
KKLTEMLTVV CENYNALRNQ MMEYMSTQNG VAEDTSAGSR KRKAESISNP VNNNNNNNNM 120
DVVHGRSSES SSSDEESCCK KLREEHIKAK VTIVSMKTDA SDTSLIVKDG YQWRKYGQKV 180
TRDNPCPRAY FRCSFAPGCP VKKKVQRSIE DQSIVVATYE GEHNHPQTSK PESGPSTNTS 240
TASRLNVTTL AGTTTSVPCS TTLNSSGPTI TLDLTAPKTL EKRDMKMNHT TTSPTSGNSI 300
RTTTTTPAGG GEYQNRPEFQ QFLIEQMATS LTKDPSFKAA LAAAISGKIL QHNNQTGRW
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | FJ654265 | 0.0 | FJ654265.1 Solanum lycopersicum WRKY transcription factor 1 mRNA, complete cds. |
