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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sopen06g015190.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
WRKY |
Protein Properties |
Length: 343aa MW: 38037.4 Da PI: 7.1406 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen06g015190.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 89 | 3.8e-28 | 126 | 185 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58
+Dgy+WrKYGqKe+ gs+fpr+YYrCt++ +Cp+kk+v+r ++dp v+e+tY+++H++
Sopen06g015190.1 126 EDGYTWRKYGQKEILGSRFPRAYYRCTHQklyHCPAKKQVQRLDNDPYVFEVTYRSQHTC 185
7****************************9999*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 343 aa
Download sequence Send
to blast |
MESNLANWAN QRDVLLSKTE EIISVFSNVK EKLIIHDVVQ EWLSNSGHQQ ALELYHATDH 60 TATATGFTVH GLPQGSDQMT ASHDSTRVAA ASSSQRQRTR CRTGDRDRRT LRVGAPRMGN 120 LELPPEDGYT WRKYGQKEIL GSRFPRAYYR CTHQKLYHCP AKKQVQRLDN DPYVFEVTYR 180 SQHTCYMSAT APTVPPPSVE EMTHQTTTTL PPAPLLLPPP TSASLSGHWL SMDIKPQGDQ 240 AGTSYTTTPF DIQRDFGHGT VGSLASLVTA GVGDVGPSGG RYGREIDYQP VVDMADAMFN 300 SGSSSNTSMD KIFSSIDDKW DTAERKNNSS YCGINILFMR NIG
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