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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sopen05g027030.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
WRKY |
Protein Properties |
Length: 366aa MW: 41321.7 Da PI: 9.235 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen05g027030.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 86.1 | 3.2e-27 | 155 | 213 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D+++WrKYGqK +kgs+fpr+YY+C+++ +C++kk++e+s++d++++ + +geHnh+
Sopen05g027030.1 155 NDKWAWRKYGQKYIKGSPFPRNYYKCSTSkHCEAKKQIEKSSKDENIFLVSCSGEHNHD 213
8*************************9988****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MYLLFKYAYP KDSEYGKFTI HYSIETTSGI ITYALGQAIT FRVGGVNQPV RDIVDEYVRE 60 KAEAYGDAVL TDIFIQIHYD QNLSSVEMNI SNDQIARLIA ESVIEKVHMP YVVGFVVVKP 120 GSAPSKEQTP LTQSQTRKNH SIMLTYESSQ EELTNDKWAW RKYGQKYIKG SPFPRNYYKC 180 STSKHCEAKK QIEKSSKDEN IFLVSCSGEH NHDPPMSRRY LASCNNNSKF KLPKGINISP 240 KESTFNASSS SSKRVKHSTD VASPIIRTKP PLEIGSKNKM VVAVVHNIGD GEEKVDMNED 300 IFMEPKDKKE ATKPSSTSQQ NSISSNRKLK VFSEEFITRF NFSASTSHLD RFPISSSTTL 360 VLSPHP
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
2ayd_A | 8e-17 | 152 | 215 | 12 | 74 | WRKY transcription factor 1 |