|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sopen05g009020.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
Family |
WRKY |
Protein Properties |
Length: 282aa MW: 31902.5 Da PI: 10.0697 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen05g009020.1 | genome | spenn | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 86.3 | 2.7e-27 | 122 | 180 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs+fpr+YY+C+++ +C++kk++e+s +d++++++ +g Hnh+
Sopen05g009020.1 122 NDIWTWRKYGQKHIKGSPFPRNYYKCSTSkHCEAKKQIEKSPKDENIFVVSCSGGHNHD 180
8*************************9988****************************7 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 282 aa
Download sequence Send
to blast |
MTSFNGLSEI VSLDFPIARQ ERSYDQVIIT NQNNNEQLYL HTIQSVQFIQ QTVVPQSRTM 60 VACVPPITTP QKCIDLQQQP DMLANIHPNL TFSMKTPLTQ SRTRKKQSIR LTYESLQEEL 120 TNDIWTWRKY GQKHIKGSPF PRNYYKCSTS KHCEAKKQIE KSPKDENIFV VSCSGGHNHD 180 PPMNRRYLAS CNNDSKFKIS KGINSLPKAS ILNASSSSSM RVKHSRVVTS PIIATKPPLE 240 IGSKSKIVVA VVQNKGDDKV KVNMTEDIFM GIDQLQRSTT ST
|