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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sopen05g009000.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
WRKY |
Protein Properties |
Length: 386aa MW: 43751.7 Da PI: 9.9877 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen05g009000.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 40.3 | 6.3e-13 | 7 | 45 | 22 | 59 |
EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 22 rsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
r+YY+C+++ +C++kk++e+s +d++++++ +g Hnh+
Sopen05g009000.1 7 RNYYKCSTSqHCEAKKQIEKSPKDENIFVVSCSGGHNHD 45
99****9888****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 386 aa
Download sequence Send
to blast |
MGLIPKRNYY KCSTSQHCEA KKQIEKSPKD ENIFVVSCSG GHNHDPPMNR RYLASCSNDS 60 KFKIPKGINS LPKASILNAS SSSSMRVKHS RVVTSPIIAT KSPLEIGSKN KMVVTVVQNK 120 GDDKVKAYRK KDFEKLMAKV EKVDGRVKKY LEEAGYERWS RSHATVNRGR MMTSNIAECI 180 NGCLVNAQKL HVLDFLEEAR ILFGSWNCKN REIASYTKET LGRKFEEILI INASKCSKMK 240 VVASSKFIFS VYEGGIRYIV CLERKNCSCG RFQHDEIPCA HAMVVLKKKN IKDVHPYCSD 300 YYKPDALANT YAVPMEPMPD KSDWIVPESV LEEVVLPPRY KKMPGKPRKK RKKNADEKLS 360 GNTNCCGRCG QEGHNRRTCT FFPKDS
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