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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopen05g005470.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
bZIP |
Protein Properties |
Length: 488aa MW: 53524.9 Da PI: 6.8462 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen05g005470.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 29.8 | 1.3e-09 | 200 | 241 | 5 | 46 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
k rr+++NReAAr+sR+RKka++++Le+ +L++ ++Lk
Sopen05g005470.1 200 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLSQLEQELK 241
7789*************************9888888887776 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009909 | Biological Process | regulation of flower development |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 488 aa
Download sequence Send
to blast |
MQAFKAAAVT INNNNNNSNS NSNSSMYCHS SYYLRGDEGS RLAARFADIG ELEQSTGFTQ 60 DDAVDLSRST VYGEMRPNNV GIVSCNNNNL HFAELNTSIG SSETGVETGR FMLQKAQTGM 120 VGGGGGGGGG GVVGGAVALG NVQHFENWGD SGIADHSQQT DTSTDVDTDE RNHQGQGVQH 180 GALIAVDSMD LSKVKLGDQK TLRRLAQNRE AARKSRLRKK AYVQQLENSR LKLSQLEQEL 240 KRARQQGIFI ANGYAGDQSL SAGGNGALAF DMDYARWLDE HQRLISDLRS AVNSHRGDNE 300 LRHLVDGVMS HYDEKFKLKS VGLKADVFHM LSGMWKTPVE RCFMWLGGFR SSELLKILGN 360 HLEPFTEQQL IGICNLQQSS QQAEDALSQG MEALQQLLVD TLSSTSLGPS GSGNVADYMG 420 QMAIAMNQLA TLENFLYQAD LLRQRTLQQL HRILTTRQAA RALLVISDYM SRLRALSSLW 480 LARPKDQL
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975444 | 1e-150 | HG975444.1 Solanum pennellii chromosome ch05, complete genome. |