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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopen05g004980.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
ERF |
Protein Properties |
Length: 398aa MW: 44236.8 Da PI: 6.2429 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen05g004980.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 32.7 | 1.8e-10 | 136 | 176 | 6 | 50 |
AP2 6 VrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaar 50
Vr +k +g+++ eIrd + + kr++lg+f t+eeA + + +
Sopen05g004980.1 136 VRKRK-SGKFATEIRDpF-----SkKRIWLGTFNTPEEASEVYQSKK 176
89888.7*********66.....44**************99886655 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 398 aa
Download sequence Send
to blast |
MKSKIKQDCI DENEVMEIER TIRVKISDPD ATESSSDDEK QEKRPKIIVH EIVQKKVKIQ 60 SFLLNSKNPL DFYQLPPPRV RKRKYQKKGV SAKSGNPPLM VDSQNLDLTK VKTCFSIKNR 120 SPLSLEQSSG KLPPMVRKRK SGKFATEIRD PFSKKRIWLG TFNTPEEASE VYQSKKLEFQ 180 EKLEKARNAN VDKVISAKFE LGSSSSSDPP LMADSQNTDS SNESVDRLKM AKNAKEKMVI 240 SAKFELGSSS SSDPSLIADS RNTDSSNESG DILKKSKNAK EKMVIFANSE PGSSSSEPIL 300 MVDEIDEQLN KAINANVEKG ISSKSELGSS SSDQVDAQTS DSSNGVEESD EDLWMGQWIQ 360 ISGDKEVKFS QKLGVPVVDN YGYLLGEFSK LDDLSISV
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