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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sopen04g033520.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
NAC |
Protein Properties |
Length: 389aa MW: 43368.2 Da PI: 4.816 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen04g033520.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 25 | 5.2e-08 | 37 | 118 | 29 | 128 |
NAM 29 eleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdW 121
+ + e++ y+++P++Lp + +f +++ + +++t+ g W+ + + e+++ ++ g ++t f++ +a+ +kt
Sopen04g033520.1 37 PD--DLIEFNPYQYDPSNLP-------DGAWFLVRKTE--------EKSTEYGLWRVKDSACEIFA-NSDISGWRTTYEFFQVQASIEQKTVY 111
33..4567788889999998.......22344444433........356899**************.9999********************** PP
NAM 122 vmheyrl 128
+mhey++
Sopen04g033520.1 112 IMHEYKV 118
*****87 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 389 aa
Download sequence Send
to blast |
MRPLSPSAPP PGLMSSCGTD GEIFLVLHQI NRGSPIPDDL IEFNPYQYDP SNLPDGAWFL 60 VRKTEEKSTE YGLWRVKDSA CEIFANSDIS GWRTTYEFFQ VQASIEQKTV YIMHEYKVTP 120 KGQRDLTKSQ ESAICRFFGL WNDAEQDDVR HLLSYFSFIP SVNPDTSGND GQRSIAEPQV 180 NGQIEGAGSS LVDKWIDQSE IDCIMRGDYL ELNDLIDGAS HDSSSSENTS RQSFVSDEFF 240 NSRALLAELD DEKKEDLSGK GSLLAELNDE KKEDLSGKGS TSNHHTIMMC QIANDVVVQP 300 GPLGFVFIGN DAKAKETQQT PDNDKSKSQD QAVKKMKAAK KLKDEGPSHA RRATSSSSSN 360 SSSDEPGRAA RREEKRSKKL MKFLCFMPF
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