|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sopen04g027740.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
Family |
ERF |
Protein Properties |
Length: 452aa MW: 49288.5 Da PI: 6.414 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen04g027740.1 | genome | spenn | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.2 | 5.4e-20 | 211 | 260 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aaka++ a+++++g
Sopen04g027740.1 211 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAAKAYDDAALRFRG 260
7********.**********7.....337*************************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 452 aa
Download sequence Send
to blast |
MCILKVANQG DSGQYDRIPS TAGDSETTTN EGIPQPYEQS QSFEEMLQQQ IQQETEYLMS 60 ESANPMYTGY SQSRDMSAMV TALTHVVSGR REAEWGYRPD ISGVTTSFGG GGGGGSGSIY 120 SANSPSSSSS GSWAGQKRRR DQEESVTGEQ AQRGYGGIGE FKNGESSSSV KLEEDTSLAT 180 PQTSSVSTTA AQTPPRASEV TGEETGERKR RYRGVRQRPW GKWAAEIRDP HKAARVWLGT 240 FDTAEAAAKA YDDAALRFRG NRAKLNFPEN VRLLPQQQQQ PTTRLAISTS SSTAAPRFQL 300 MSAASARSPS PSPSPFFQSY NQPPRQPDQN QQQQLFQSSD MARDYWEYSQ LLQNPIDFHG 360 GQQSSSLLEQ MLLASSLGVL HSHTFPSSSS SSLATSAASS TTSPAYPLFY SAQQSRFFQP 420 QTHQNQSNSS SNTSNFPPPF WTSSGHYPPS SS
|