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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopen04g025260.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
WRKY |
Protein Properties |
Length: 411aa MW: 47053.4 Da PI: 7.5182 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen04g025260.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 101.7 | 4.1e-32 | 53 | 110 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgy+WrKYGqK+vkgsefprsYY+Ct ++C+vkkkvers +++++ei+Y+geHnh+k
Sopen04g025260.1 53 DDGYTWRKYGQKTVKGSEFPRSYYKCTGQNCTVKKKVERSP-NGQITEIIYNGEHNHQK 110
8****************************************.***************85 PP
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2 | WRKY | 106.6 | 1.2e-33 | 213 | 271 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Cts++Cpv+k++er+ +d k v++tYeg+Hnh+
Sopen04g025260.1 213 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSPSCPVRKQIERAPDDIKSVITTYEGKHNHQ 271
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 411 aa
Download sequence Send
to blast |
MQITSRYHEL GTCSSDIKPE ENMSGIINFT NTTKQENYHR AMNPNISNST GPDDGYTWRK 60 YGQKTVKGSE FPRSYYKCTG QNCTVKKKVE RSPNGQITEI IYNGEHNHQK SQPIRRAITS 120 SKSCDLTEIL NHPNINMNLF ETTREPCSPL VSCEDEDEDE DEVRAIGGII SIDDNEFEQR 180 RRRDYYPAEM NLSSRSTKEP RVIVQIESEI DILDDGYRWR KYGQKVVKGN PNPRSYYKCT 240 SPSCPVRKQI ERAPDDIKSV ITTYEGKHNH QVPSINKTNG VTATATVGNQ SSPLMSNDKS 300 SMLPFSESHK VSNLETQVQD FNFQLERTNF VENQLSNLRC GPLFDLRFPP NLLSYNSFLF 360 NSTHISNSLP FNLQMPHFSL PNRVPPPDEF HFNINTISSN KKSKASLRDQ Q
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Functional Description ? help
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Source |
Description |
UniProt | Transcription repressor (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (By similarity). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000250|UniProtKB:Q6QHD1}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:25110688). Slightly down-regulated by gibberellic acid (GA) (By similarity). Accumulates in response to jasmonic acid (MeJA) (PubMed:16919842). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000269|PubMed:16919842, ECO:0000269|PubMed:25110688}. |