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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sopen04g006170.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
ERF |
Protein Properties |
Length: 364aa MW: 40455.5 Da PI: 6.6917 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen04g006170.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 65.3 | 1.2e-20 | 109 | 158 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae+Aa+a+++ ++k++g
Sopen04g006170.1 109 RYRGVRQRP-WGKWAAEIRDPY----KaARVWLGTFDTAEDAARAYDETALKFRG 158
7********.**********76....35************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MSVMVTALTR VITGEDRILN QENNNHNNII GSSSLNEFSG GVGEKRGREE QQYFLSDIIS 60 SSKVGEDSSI NRTIASNTPT TEATFIYTSP TYDHNNNTNI IDCNQPRRRY RGVRQRPWGK 120 WAAEIRDPYK AARVWLGTFD TAEDAARAYD ETALKFRGSK AKLNFPENVR LLPTSSIASQ 180 NVVGNQGFSM EKQSLTNTFP SNSVESNLEF LTEKKVLTST FPVENNMVFS RERQFLTDTF 240 PTEYVPVSSI ISPNTPPNTL STISFFPNSN PIAHTQLSNS NSEINTQYFL NGDFQRGNSS 300 LSLLNQSMFS TTFQYSSSSP SSSSSSRVPF VPSMYISGSQ PISQSSENDF RATSSDSAHH 360 PPSK
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